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Orthology Predictors
Reciprocal BLAST Best Hit (RBH)
OrthoMCL
InParanoid
Reciprocal Smallest Distance (RSD)
Orthology Databases
InParanoid
eggNOG
OMA Browser
HOGENOM
OrthoDB
Functional annotation
PFAM
Prosite
Gene Ontology
UniProt
PubMed
Technology
PCSS
Django
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Protein sequence (Plain/Fasta)
Example 1
Example 2
Input sequence from
Homo sapiens (Human)
Arabidopsis thaliana (Mouse-ear cress)
Mus musculus (Mouse)
Caenorhabditis elegans
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakre's yeast)
Output sequence from
Ornithorhynchus anatinus (Duckbill platypus)
Arabidopsis thaliana (Mouse-ear cress)
Mus musculus (Mouse)
Caenorhabditis elegans
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakre's yeast)
Analyses
Reciprocal BLAST Best Hit (RBH)
OrthoMCL
InParanoid
Reciprocal Smallest Distance (RSD)
On-line Orthology Databases
eggNOG 4.5
InParanoid 8
OMA
HOGENOM/HOVERGEN
OrthoDB
Functional Annotation
Generate pair-wise alignment
Fetching domain architecture
Prosite Functional sites
Retrieve Gene Ontology
Fetching PubMed literature
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